普通參數 -h | -help -o | -output-dir default. $ cufflinks -p 8 -G transcript.gtf -library-type fr-unstranded -o cufflinks_output tophat_out/accepted_hits.bamģ. You are using Cufflinks v2.2.1, which is the most recent release.įile 30 doesn't appear to be a valid BAM file, trying SAM.Įrror: cannot open alignment file 30 for reading cufflinks計算multi-mapped reads，一般a read map到10個位置，則每個位置記為10%。aread mapping to 10 positions will count as 10% of a read at eachposition.ģ. configure -prefix=/path/to/cufflinks/install -with-boost=/usr/local/ -with-eigen=/usr/local/include//Eigen/ĥ. 安裝Cufflinks。 $ tar zxvf cufflinks-2.0.2.tar.gz
0 kommentar(er)
